Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904895.1_cds_XP_016454987.1_48960
CDS Infomation

[gene=LOC107779148] [db_xref=GeneID:107779148] [protein=uncharacterized protein LOC107779148 isoform X3] [protein_id=XP_016454987.1] [location=complement(join(1396..1965,3027..3113,3216..3328,3445..3628,4249..4335,4965..5051,5306..5633,6244..6366,6460..6488))] [gbkey=CDS]
Sequence

ATGCACCCGAAGCCATTTCAGAATTTCAAATGTGCTTCAATCCGAGCGATTGAGACTGGC
TCCGAGTATCACATGAGGAAGCTAATTACATATTGGACCATCTTTTCCTTTATTTCTCTG
TTCGAGCACGTATTTGAGAAACTTATCGAATGGGTTCCTCTGTGGCCATATATAAAATTA
ATTACCATATGTTGGCTGGTAATACCTCAGTTTAATGGCGCGTGTTATTTTTATCAAAAT
CTTATTCATCCAAGTTTGCTGGTGAAACTGGACGCTGTTATCACTCAGTTTTATGGTTCT
TGTTATGTTTACCAACGCCTTCTATATTCGTGCTTGTCTGTCAACCTTCAAATTGTCACT
GACTGGCTTAACAAGCCAATGGAGGATCCATCTCTCGATTATAAATCGTTTCTGGCTATG
GCAGAGAGGTATCTCGAGGAAAATGGATCTGATGATCTGGTGAAACTTATTGCAAGCAAG
TCCAAGGATTATAGTTTGAATCATTATGTTGAAGAGATAAAGACTATTGATGCTAGTGAT
GAAGCAGGAATGCTTATACCCAACCAGATAGTGTGTGAAGGGGCTGGTTCCTTTTGGAAA
GATATCAAAACGATGGAACACATGGCAAAACATGAAGCAGCTGAGCCCAAACATGTTAAA
AGTGTAAGGGAAAATCTAATTTGGATTGAGAAGAAAACGACAGGAACACAGGTCAATGAA
ACAGCAGCTCCAACAAATCAGGTAAATCAGCTTAAGCAGGAGGAAGTTAAGCATGCCGCT
GCAGTACGATCAGAGCACAGTACTAATGAAGAATTGAAAGAAAAAGTCCACCTATCAGCT
GCAGATCTTAACGGGAGGGAGCACTTGGTCAAACTCCAAAAAACAATGAGTTCTACGGCT
GTGGCAGAAGAGAATGAATGTAGTGCACCAGAGGAACTTATTGCAAACAAGTCCAAGGAT
CATAGTTTGAATCATCATGGGGAAGGGATCAAGGCTACAGACATTTGTGATAAAGCAGGA
ATACTCACCCCCAGCCAGGCTAAGCCTGACACAATTTTCCCTGGACCAAAATTGGAAGTT
GTAACACCAACTTCCAAGCCTTCATCAAGCAGTTCTCTAAAGGAAAATGTTAAAGTGTGG
AGTTGTGCACATTGTCAGATAAGTACTACAAGCGAAGGTGACCTGAATGAGCATCTCCAA
GGAAAGAAACACAAAAAGAAGGAGGCTGCTTTTAGAGCAGAGAAGGATGAGAAAAACTAC
AACATTGATCCTTTACAAAATAAACCTAAATCCATCCAGTTTGTGGAATCTTGCAATGAT
CTGAGAATAGGGCAGAAATCAGAAGAATGCTCATTAGGGCCAAACGACAATGATGCACCA
TCCTTGTTGATAGATGACAATGCAGATGACTTGAGAAAAAATGTATATAATACAACTCAT
GAAAAGCAAAACAGTAAGGAGCATGAGAATAGAGAGTTCAAATTTTGGTGTGAGACATGC
AAGGTAGGGACCTTGTCTGAAAAGGTGATGGAGGACCATAAGATGGGAAAGAAGCATGCC
CGGCATCTTCGACAACTTGAACAAGCAGTGCTAATAACAAATTCATGA

Peptide Sequence

PEP ID

XP_016454987.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107779148 isoform X3 [Nicotiana tabacum]
Sequence

MHPKPFQNFKCASIRAIETGSEYHMRKLITYWTIFSFISLFEHVFEKLIEWVPLWPYIKL
ITICWLVIPQFNGACYFYQNLIHPSLLVKLDAVITQFYGSCYVYQRLLYSCLSVNLQIVT
DWLNKPMEDPSLDYKSFLAMAERYLEENGSDDLVKLIASKSKDYSLNHYVEEIKTIDASD
EAGMLIPNQIVCEGAGSFWKDIKTMEHMAKHEAAEPKHVKSVRENLIWIEKKTTGTQVNE
TAAPTNQVNQLKQEEVKHAAAVRSEHSTNEELKEKVHLSAADLNGREHLVKLQKTMSSTA
VAEENECSAPEELIANKSKDHSLNHHGEGIKATDICDKAGILTPSQAKPDTIFPGPKLEV
VTPTSKPSSSSSLKENVKVWSCAHCQISTTSEGDLNEHLQGKKHKKKEAAFRAEKDEKNY
NIDPLQNKPKSIQFVESCNDLRIGQKSEECSLGPNDNDAPSLLIDDNADDLRKNVYNTTH
EKQNSKEHENREFKFWCETCKVGTLSEKVMEDHKMGKKHARHLRQLEQAVLITNS

Transcript Sequence

Gene sequence data has not been registered.